pseudoreplication

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dataRichinsightPoor / threshold-is-part-of-the-measurement

Simulation code for 'The Threshold Is Part of the Measurement' (Data-Rich, Insight-Poor - CCV). Synthetic-specimen simulations quantifying how far routine fluorescence image-analysis choices move a reported effect.

image-analysis reproducibility batch-effects fluorescence-microscopy pseudoreplication

Updated Sep 2, 2026
Python

s4s4s4s / pbcheck

Star

An auditor of pseudoreplication in single-cell RNA-seq differential expression. Phase 0: pre-registered measurement study.

python cli bioinformatics scrna-seq single-cell differential-expression anndata pseudobulk pseudoreplication

Updated Oct 1, 2026
Python

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