HySonLab / LatentDE Star 38 Code Issues Pull requests LatentDE: Latent-based Directed Evolution for Protein Sequence Design evolutionary-algorithm gradient-ascent variational-autoencoder protein-language-model directed-evolution protein-optimization Updated Apr 2, 2025 Python
zarifikram / gg-dWJS Star 7 Code Issues Pull requests (TMLR '24) Gradient guided discrete walk-jump sampling antibody-design discrete-generative-models protein-optimization Updated Jan 23, 2025 Python
HySonLab / Q-BIOLAT-Extended Star 2 Code Issues Pull requests Q-BioLat: Binary Latent Protein Fitness Landscapes for QUBO-Based Optimization genetic-algorithm quantum-computing drug-discovery simulated-annealing quantum-annealing qubo greedy-hill-climbing protein-fitness-prediction protein-language-model protein-optimization latent-bayesian-optimizaiton Updated Mar 31, 2026 Python
HySonLab / Q-BIOLAT Star 2 Code Issues Pull requests Binary Latent Protein Fitness Landscapes for Quantum Annealing Optimization protein quantum-computing protein-design quantum-annealing qubo protein-fitness-prediction protein-language-model protein-optimization Updated Mar 31, 2026 Python
kipuki / protein_mesh_simulated_annealing Star 1 Code Issues Pull requests Provides simulation optimization software for protein meshes using simulated annealing. python simulated-annealing protein-optimization Updated Mar 19, 2025 Python