Python client for PRIDE Archive Rest API.
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Jul 29, 2026 - Python
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pride-database
Here are 10 public repositories matching this topic...
A R-package for meta data query of PRIDE database
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Feb 7, 2017 - R
a timeline and database of pride flags, also a usable API
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Aug 29, 2024 - JavaScript
Audit PRIDE proteomics study metadata from the command line. Scores each dataset on a 7-tier FAIR ladder and a quantification-readiness axis. Results land in a local SQLite database.
python cli metadata bioinformatics sqlite proteomics mass-spectrometry pride-database data-quality fair-data
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Aug 31, 2026 - Python
ProMetaDB | an unified resource for proteomics metadata
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Jan 17, 2019 - HTML
Snakemake workflow that reanalyzes proteomics data from a PRIDE Archive project to create a spectral library
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Mar 11, 2020 - Python
NextFlow and NF-Core workflow that convert PRIDE Complete submissions to json files including PSMs, Peptides and Proteins.
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Nov 4, 2022 - Java
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Jul 1, 2020 - Nextflow
A R-package for meta data query of PRIDE database
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Feb 7, 2017 - R
Sample and data relationship format (SDRF) metadata files of ECM proteomics studies from the Naba lab
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Jan 6, 2026
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