dropseq

Here are 9 public repositories matching this topic...

A SingleCell RNASeq pre-processing snakemake workflow

yaml picard snakemake pipeline plot conda multiqc star umi reference-genome drop-seq dropseq scrbseq scrb-seq dropseqtools

A tool that allows to get UMI counts from a single cell protein assay

single-cell 10x dropseq citeseq

Pipelines in genomics

snakemake genomics rnaseq guix dropseq bisulfite-sequencing chipseq

Breast Cancer Single Cell Atlas

dropseq singlecell cell-lines breastcancer gf-icf

Pipeline for analysis of Dropseq single cell data

Workflows for handling automatic single-cell RNA seq analysis

dropseq smartseq2

Pipeline to process DROP-seq data

adtseq provides simple Rcpp methods to identify Antibody-Derived-Tags in single cell CITE/REAP-seq data

scrna-seq 10x 10x-genomics scrnaseq drop-seq dropseq dropseqtools scrna-seq-analysis citeseq cite-seq

SBC analysis with DIGIST

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