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chip-seq-data

Here are 6 public repositories matching this topic...

optimalTAD

cosmoskaluga / optimalTAD

Topologically Associating Domain optimal set prediction using Armatus software

bioinformatics-pipeline tads chip-seq-data hic-analysis armatus

Updated Aug 17, 2026
Python

sajadamouei / chip-seq-dataset-decoding

Decode coverage.bedGraph files that use the run-length encoding format.

coverage machine-learning bed bedgraph run-length-decoding chip-seq-data

Updated Apr 27, 2023
Jupyter Notebook

Genometric / Di4

1D intervals incremental inverted index

genomics inverted-index spatial-index indexing-engine temporal-data genomics-search ngs-data indexing-querying chip-seq-data di4 di3

Updated Jul 29, 2019
C#

lakhanp1 / chipmine

R package for exploratory analysis of ChIPseq data

exploratory-analysis chipseq chip-seq-data

Updated Aug 1, 2022
R

sebastian-gregoricchio / SPACCa

Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples

somatic-variants mutation gatk mutations chip-seq somatic-mutations normalization mutation-analysis copynumber macs chip-seq-callers macs2 chipseq somatic-indels gatk4 chip-seq-data chip-seq-analysis chip-seq-peaks somatic-variant

Updated Jul 5, 2026
Python

sivkri / Schizosaccharomyces-pombe-Chip-seq-analysis

After getting the bed file from the Peak calling, we can annotate and create all downstream analysis of two sets of data

transcription-factors epigenetics chip-seq functional-genomics chip-seq-data chip-seq-analysis regulatory-elements chip-seq-pipeline epigenetics-data schizosaccharomyces-pombe

Updated Jun 9, 2023
R

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