I am a bioengineer and bioinformatics scientist pursuing a PhD in Computational Biology, working in the Cancer Research Center of Toulouse and the Vera Pancaldi Lab.
My research focuses on understanding cancer biology and tumor ecosystems through quantitative and computational approaches, including multiscale and multicellular modeling, transcriptomics, and immuno-oncology.
- 🧬 Cancer biology, tumor microenvironment, and immuno-oncology
- 🔬 Bulk and single-cell RNA-sequencing analysis, cell-type deconvolution, and gene regulatory networks
- 🤖 Machine learning and computational modeling for biological systems
- 🧪 Computational genome editing with CRISPR-Cas9, gRNAs, and zinc fingers
- 🌱 Currently exploring spatial transcriptomics, reinforcement learning, and epigenomics
These are the main software packages I have developed
 multideconv |
 pipeML |
 CellTFusion |
 RaCInG 2.0 |
Note: RaCInG 2.0 is an improved version of an existing package, check the project for more details.
| Project | Description |
|---|---|
| LungPredict1_paper | Profiling the NSCLC tumor microenvironment from transcriptomic data. |
| LungPredict_DC_paper | Transcriptomic and spatial analysis of dendritic-cell subsets in immunotherapy response. |
| NLC-CLL_HPC_exploration | Parameter exploration for the NLC–CLL PhysiCell model. |
| ABM_NLC-CLL | Agent-based modeling of NLC dynamics in chronic lymphocytic leukemia. |
Programming and analysis
Platforms and tools
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