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@axondeepseg

AxonDeepSeg

Segmentation software for microscopy data of nerve fibers based on deep learning.

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  1. axondeepseg axondeepseg Public

    Axon/Myelin segmentation using Deep Learning

    Python 129 33

Repositories

Showing 10 of 34 repositories
  • axondeepseg Public

    Axon/Myelin segmentation using Deep Learning

    axondeepseg/axondeepseg's past year of commit activity
    Python 129 MIT 33 50 5 Updated Sep 18, 2026
  • g-ratio-delphi Public

    Visualize responses of Google Form CSV export

    axondeepseg/g-ratio-delphi's past year of commit activity
    Python 0 0 1 0 Updated Sep 15, 2026
  • model_seg_tem-multires Public
    axondeepseg/model_seg_tem-multires's past year of commit activity
    0 0 0 0 Updated Aug 15, 2026
  • model_seg_killifish Public

    Myelinated & Unmyelinated Axon Segmentation in Teleost Killifish TEM Images

    axondeepseg/model_seg_killifish's past year of commit activity
    Python 0 0 0 0 Updated Aug 3, 2026
  • ASTIH Public

    Axon Segmentation Training Initiative for Histology: A collection of datasets for axon and myelin segmentation in microscopy images.

    axondeepseg/ASTIH's past year of commit activity
    Python 3 MIT 0 3 0 Updated May 29, 2026
  • seg_ci Public
    axondeepseg/seg_ci's past year of commit activity
    Shell 0 0 0 0 Updated Apr 8, 2026
  • awesome-histology-segmentation Public
    axondeepseg/awesome-histology-segmentation's past year of commit activity
    1 CC0-1.0 0 1 1 Updated Mar 19, 2026
  • eval-object-det Public

    Pipeline to compare semantic segmentation model output against manual cell counts. We compute Precision, Recall and F-Score

    axondeepseg/eval-object-det's past year of commit activity
    Python 0 0 0 0 Updated Jan 16, 2026
  • data-testing Public

    Images and files used for software testing (unit and integration tests).

    axondeepseg/data-testing's past year of commit activity
    0 MIT 0 0 0 Updated Nov 5, 2025
  • doc-figures Public

    Repository that contains most figures for axondeepseg documentation.

    axondeepseg/doc-figures's past year of commit activity
    0 MIT 0 0 0 Updated Sep 17, 2025
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