Home

Contents

Computing:

• Using Farm: Start here. Accounts, SSH keys, logging in, high vs low, batch and interactive jobs, storage.
• Farm Tips and Tricks: Monitoring jobs and lab resources, job efficiency, restartable low jobs, scratch, GPUs.
• Farm Software Installation: Modules, conda/mamba, R packages, compiling.
• Using Hive: The other HPC@UCD cluster the lab uses (same /quobyte storage).

Maize information:

• 100 things to know about maize
• Maize Genome Resources: An index of maize genome resources.
• Maize Community Links: Panzea, and other collaborator resources.
• Maize literature: Articles, books, etc.

Lab protocols:

• Wetlab Protocols: Lists of shared protocols for wetlab work.
• Germplasm: Information on germplasm database and usage
• Field: Information on growing, crossing, and phenotyping corn

Lab Calendar

Contributing

There are two ways to contribute to this lab wiki:

1. By editing online using Github's wiki editor.
2. Cloning and working with the Markdown files locally.

To clone this lab wiki, use:

$ git clone git@github.com:RILAB/lab-docs.wiki.git lab-wiki

Then, edit each file in your text editor, commit the changes, and push them. If you're denied access to push, let Jeff know. For more information, see Contributing to the Lab Wiki.