Our lab is located at the Institute for Systems Biology in Seattle, Washigton. We are interested in the ecology, evolution, and emergent function of host-microbial systems. The team is led by Dr. Sean Gibbons. Our toolset includes ecological and evolutionary theory, applied math and biostatistics, and computational systems biology. Most of our work is within the computational domain, but we occaisionally run our own experiments. Our fundamental aim is to discover and formalize the biological rule sets governing host-microbe systems, and apply these rules to engineer microbial ecoystems to improve human and environmental health.
Gibbons Lab
The Gibbons Lab -- Microbes + Ecology + Medicine @ the Institute for Systems Biology.
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Repositories
Showing 10 of 48 repositories
- 2026_Easton_VNS Public
Non-invasive Vagal Nerve Stimulation as a Potential Treatment for Repetitive Blast
- 2026_Cavon_lifestyle_and_multi-omic_determinants_of_sleep_quality Public
Data analysis and visualization code for "Multivariate determinants of wearable-measured sleep quality across a large observational cohort: roles of physical activity, gut microbiome, blood analytes, and lifestyle factors"
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- manuals-and-policies Public
- isb_course_2024 Public
- 2024_probiotic_engraftment Public
- 2025_schoch_methane Public
Jasmine's work using MICOM to model methane production in the rumen microbiome (rumen metagenomes from Andersen paper)
- cdiff_invasion Public
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