Updates to fix API

[RyanJField]

Updated .gitignore to ignore build directories and output directories for api and dataregistry modules, as well as graphify-out directory.
This helps to keep the repository clean from generated files and directories that are not necessary to track in version control.

[codecov]

Codecov Report

❌ Patch coverage is 66.66667% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 71.37%. Comparing base (87b6a40) to head (261e244).

Files with missing lines	Patch %	Lines
...rc/main/java/org/fairdatapipeline/api/Coderun.java	50.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff            @@
##             master      #11   +/-   ##
=========================================
  Coverage     71.37%   71.37%           
  Complexity      446      446           
=========================================
  Files            79       79           
  Lines          1509     1509           
  Branches         97       97           
=========================================
  Hits           1077     1077           
  Misses          331      331           
  Partials        101      101           

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