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ETHZ-INS

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  1. DLCAnalyzer DLCAnalyzer Public

    R Scripts to analyze deep lab cut point data and related data

    R 72 20

  2. BehaviorFlow BehaviorFlow Public

    Code package that allows meta analyses of unsupervised behavior results

    R 22 2

  3. enrichMiR enrichMiR Public

    miRNA target enrichment analysis

    R 7 1

  4. diffUTR diffUTR Public

    The diffUTR R package streamlines differential exon usage (DEU) analyses, and leverages existing DEU tools and alternative poly-adenylation site databases to enable differential 3' UTR usage analysis.

    R 7 1

  5. scanMiR scanMiR Public

    A set of tools for scanning for miRNA binding sites and working with affinity models

    R 6 2

  6. pupillometry pupillometry Public

    A shiny app for pupillometry data analysis

    R 4

Repositories

Showing 10 of 41 repositories
  • scanMiR Public

    A set of tools for scanning for miRNA binding sites and working with affinity models

    ETHZ-INS/scanMiR's past year of commit activity
    R 6 GPL-3.0 2 1 0 Updated Sep 30, 2026
  • epiwraps Public

    Wrappers for dealing with and plotting epigenomics data

    ETHZ-INS/epiwraps's past year of commit activity
    R 3 GPL-3.0 1 0 0 Updated Sep 28, 2026
  • scanMiRApp Public

    Shiny app (and further functionalities) for scanMiR

    ETHZ-INS/scanMiRApp's past year of commit activity
    R 0 0 3 0 Updated Sep 19, 2026
  • TFB-analysis Public

    Repository containing scripts for employing TFBlearner

    ETHZ-INS/TFB-analysis's past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Sep 10, 2026
  • diffUTR Public

    The diffUTR R package streamlines differential exon usage (DEU) analyses, and leverages existing DEU tools and alternative poly-adenylation site databases to enable differential 3' UTR usage analysis.

    ETHZ-INS/diffUTR's past year of commit activity
    R 7 1 0 0 Updated Aug 28, 2026
  • motif_analysis_paper Public

    Code for the motif analysis paper

    ETHZ-INS/motif_analysis_paper's past year of commit activity
    R 0 0 0 0 Updated Aug 20, 2026
  • scDblFinderPy Public

    A Python implementation of the scDblFinder R package.

    ETHZ-INS/scDblFinderPy's past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Aug 14, 2026
  • TFB_Prediction_Benchmark Public

    Preregistered under: https://osf.io/kv2tw/overview

    ETHZ-INS/TFB_Prediction_Benchmark's past year of commit activity
    Python 0 0 0 0 Updated Aug 13, 2026
  • scDblFinderPy_paper Public

    Code for the scDblFinderPy paper

    ETHZ-INS/scDblFinderPy_paper's past year of commit activity
    Python 1 0 0 0 Updated Aug 12, 2026
  • Kretschmer-et-al.2025 Public

    Repository contains code and most necessary objects as well es folder structure to replicate plots from the paper, which were generated in R

    ETHZ-INS/Kretschmer-et-al.2025's past year of commit activity
    HTML 0 0 0 0 Updated Aug 6, 2026
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