Issues

• summarizeOverlaps warnings

  Bioconductor/GenomicAlignments#36 · Filter by author sunta3iouxos opened on Oct 30, 2024
  3

• Error in isCompatibleWithSkippedExons() for single-end read alignments w/ more than 3 junctions

  Bioconductor/GenomicAlignments#33 · Filter by author rcastelo opened on Dec 11, 2023

• Permission for SweaveToRmd

  Bioconductor/GenomicAlignments#27 · Filter by author SunSummoner opened on Mar 8, 2023
  10

• mapFromAlignments() and soft-clipping

  Bioconductor/GenomicAlignments#12 · Filter by author hpages opened on Feb 14, 2020
  6

  

• Clarify Strandedness Options for SummarizeOverlaps in Documentation

  Bioconductor/GenomicAlignments#7 · Filter by author groverj3 opened on Jul 25, 2019
  1

• Clarify Counting of Query-Spanning Reads in Documentation

  Bioconductor/GenomicAlignments#6 · Filter by author DarioS opened on Jul 19, 2019

• Performance of readGAlignmentPairs with inter-chromosomal pairs

  Bioconductor/GenomicAlignments#4 · Filter by author LTLA opened on Mar 31, 2019

• Error using granges with unused argument on.discordant.seqnames

  Bioconductor/GenomicAlignments#3 · Filter by author sda910722 opened on Jun 20, 2018
  1