Issues

• error in netVisual_bubble plotting

  sqjin/CellChat#751 · Filter by author Zhasha95 opened on Jan 22, 2024
  4

• explanation of the df from subsetCommunication

  sqjin/CellChat#750 · Filter by author amberqiong opened on Jan 19, 2024
  4

• mergeCellChat

  sqjin/CellChat#749 · Filter by author dianalee92 opened on Jan 17, 2024

• could not find function "findEnrichedSignaling"

  sqjin/CellChat#748 · Filter by author yueli8 opened on Jan 17, 2024
  1

• Error in base::colSums(x, na.rm = na.rm, dims = dims, ...) : 'x' must be an array of at least two dimensions

  sqjin/CellChat#747 · Filter by author yueli8 opened on Jan 17, 2024
  5

• Using a two-species sample

  sqjin/CellChat#746 · Filter by author juanjaureguilozano opened on Jan 16, 2024
  1

• unused arguments (min.dist = 0.3, n.neighbors = k)

  sqjin/CellChat#745 · Filter by author yueli8 opened on Jan 15, 2024
  1

• cellchat@data.signaling 0 x 12257 sparse Matrix of class "dgCMatrix"

  sqjin/CellChat#743 · Filter by author changtongwa opened on Jan 8, 2024
  2

• Error in createCellChat object

  sqjin/CellChat#742 · Filter by author TZUwang opened on Jan 7, 2024

• Why haven't we utilized single-cell proteomics for cell communication recognition and prediction?

  sqjin/CellChat#740 · Filter by author YuzhiSun opened on Jan 3, 2024
  1

• Issue with installing CellChat package in R studio

  sqjin/CellChat#739 · Filter by author Navya156 opened on Dec 29, 2023
  1

• parameter "group.by" in subsetCellChat doesn't work

  sqjin/CellChat#738 · Filter by author ttrrtttrrt opened on Dec 29, 2023

• Missing Column annotation in LRsig after merge cellchat and celltalk L-R pair

  sqjin/CellChat#737 · Filter by author wuy33 opened on Dec 28, 2023

• NetP empty after running computeCommunProb

  sqjin/CellChat#736 · Filter by author Dena2021 opened on Dec 19, 2023
  1

• Error in if (dim(prob)[3] <= 25) { : argument is of length zero

  sqjin/CellChat#735 · Filter by author yueli8 opened on Dec 15, 2023
  2

• error with identifyOverExpressedGenes(cellchat)

  sqjin/CellChat#734 · Filter by author sanskritidey opened on Dec 13, 2023
  1

• netAnalysis_signalingRole_network cluster.cols and cluster.rows not working

  sqjin/CellChat#733 · Filter by author Gabbbbbbb opened on Dec 12, 2023
  1

• Error netVisual_heatmap() on a merged object from Seurat

  sqjin/CellChat#732 · Filter by author molybdenumt opened on Dec 11, 2023

• comparing dataset error in netAnalysis_signalingChanges_scatter

  sqjin/CellChat#730 · Filter by author Leob44 opened on Dec 4, 2023
  1

• scale.factors with colnames ratio and tol should be provided!

  sqjin/CellChat#729 · Filter by author QianChwnLyn opened on Dec 1, 2023
  1

• How can I performe cellchat in a Seurat v5 object?

  sqjin/CellChat#728 · Filter by author carlosccfraga opened on Nov 29, 2023

• CellChat2 computeCommunProb error

  sqjin/CellChat#727 · Filter by author kcavagnero opened on Nov 21, 2023
  1

• Is there a minimum sample requirement for running CellChat on bulk RNA-seq data?

  sqjin/CellChat#725 · Filter by author minghao622 opened on Nov 7, 2023

• Error in obj2 - obj1 : non-conformable arrays

  sqjin/CellChat#724 · Filter by author galaxyeee opened on Nov 6, 2023
  1

• Additional details to circle plot?

  sqjin/CellChat#723 · Filter by author jcshuy opened on Nov 3, 2023