Issues

• patch tracking issue

  cryoem/eman2#585 · Filter by author prbprb2 opened on Jun 27, 2026
  1

• [Recommended Conda] Installation causes dependency conflicts

  cryoem/eman2#582 · Filter by author walidabualafia opened on Jan 23, 2026
  7

• e2tomogram_refine.py requires flax module

  cryoem/eman2#581 · Filter by author EricDeveaud opened on Sep 15, 2025

• some tools still use removed matplotlib.use('Agg',warn=False) syntax

  cryoem/eman2#580 · Filter by author EricDeveaud opened on Sep 15, 2025

• eman2.org is down

  cryoem/eman2#578 · Filter by author TimKirk opened on Jun 12, 2025
  4

• 2.99.67 Version ctest test py-compile failed SyntaxError: invalid syntax

  cryoem/eman2#577 · Filter by author lillianokok opened on May 28, 2025
  3

• Standard Binary Install Download Link Broken

  cryoem/eman2#576 · Filter by author lijiebio opened on May 7, 2025
  2

• Please provide linux-aarch64 Conda build

  cryoem/eman2#575 · Filter by author martin-g opened on Jan 17, 2025
  4

• 2.99.57 Version ctest test failed

  cryoem/eman2#574 · Filter by author simon28li opened on Sep 5, 2024
  5

• RuntimeError: Exception at /home/eman2/etc.../emutil.cpp:943: 'The mode size was 0?' caught

  cryoem/eman2#573 · Filter by author GiampaoloMart opened on Aug 30, 2024
  2

• E2gmm_model_fit.py failed to run

  cryoem/eman2#572 · Filter by author AAUHFZ opened on Aug 25, 2024
  2

• RuntimeError: FileAccessException at ...libEM/io/hdfio2.cpp

  cryoem/eman2#571 · Filter by author tiborauer opened on Jun 27, 2024
  9

• Installation through conda

  bug
  cryoem/eman2#569 · Filter by author onnonym opened on Dec 7, 2023
  1

• instructions to install to existing anaconda

  cryoem/eman2#568 · Filter by author kamanlsu opened on Jun 15, 2023
  5

• substitution for runpar in eman2

  cryoem/eman2#567 · Filter by author Qiangong2 opened on Apr 14, 2023
  3

• Dependency installation issue

  cryoem/eman2#565 · Filter by author mcleanm opened on Apr 6, 2023
  1

• cannot find fftw3d and fftw3f header files.

  cryoem/eman2#560 · Filter by author Hik289 opened on Mar 6, 2023
  13

• libboost_python37.so.1.76.0: cannot open shared when test e2speedtest.py

  cryoem/eman2#556 · Filter by author Tom-python0121 opened on Nov 23, 2022
  1

• RuntimeError: std::exception caused by xform_align_nbest

  cryoem/eman2#551 · Filter by author lyw8120 opened on Aug 27, 2022
  1

• e2ctf_auto in lores mode does not produce particle sets

  cryoem/eman2#549 · Filter by author kvr2007 opened on Jul 27, 2022

• Not defined variable in e2spt_tempmatch.py

  cryoem/eman2#546 · Filter by author thorstenwagner opened on Jul 22, 2022
  4

• corner cases of Transform class

  cryoem/eman2#543 · Filter by author wjiang opened on Feb 18, 2022
  7

• Useless code in libEM/emdata_transform.cpp

  cryoem/eman2#459 · Filter by author jcbollinger opened on Apr 10, 2020

• lacks a type converter from python utf string or bytes to std::string

  cryoem/eman2#448 · Filter by author inter1965 opened on Jan 19, 2020