diff --git a/.github/workflows/coveralls-main.yaml b/.github/workflows/coveralls-main.yaml
index e3317d6f..9ed4ff6e 100644
--- a/.github/workflows/coveralls-main.yaml
+++ b/.github/workflows/coveralls-main.yaml
@@ -16,7 +16,7 @@ concurrency:
 jobs:
   coveralls:
     name: Build main coverage baseline
-    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
       checks: write
diff --git a/.github/workflows/daily.yaml b/.github/workflows/daily.yaml
index e319e712..337d381f 100644
--- a/.github/workflows/daily.yaml
+++ b/.github/workflows/daily.yaml
@@ -15,7 +15,7 @@ concurrency:
 jobs:
   unit:
     name: Unit
-    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
       checks: write
diff --git a/.github/workflows/dependency-floors.yaml b/.github/workflows/dependency-floors.yaml
index 5d578e4c..1ac1ce35 100644
--- a/.github/workflows/dependency-floors.yaml
+++ b/.github/workflows/dependency-floors.yaml
@@ -15,7 +15,7 @@ concurrency:
 jobs:
   lowest:
     name: Lowest dependencies
-    uses: CCPBioSim/.github/.github/workflows/ci-lowest-dependencies.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-lowest-dependencies.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
diff --git a/.github/workflows/pr.yaml b/.github/workflows/pr.yaml
index eaaace5d..925cd76c 100644
--- a/.github/workflows/pr.yaml
+++ b/.github/workflows/pr.yaml
@@ -13,7 +13,7 @@ concurrency:
 jobs:
   unit:
     name: Unit
-    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-test-python.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
       checks: write
@@ -28,7 +28,7 @@ jobs:
 
   lowest-dependencies:
     name: Lowest dependencies
-    uses: CCPBioSim/.github/.github/workflows/ci-lowest-dependencies.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-lowest-dependencies.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
@@ -107,7 +107,7 @@ jobs:
   docs:
     name: Docs
     needs: unit
-    uses: CCPBioSim/.github/.github/workflows/ci-docs.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-docs.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
@@ -117,7 +117,7 @@ jobs:
   pre-commit:
     name: Pre-commit
     needs: unit
-    uses: CCPBioSim/.github/.github/workflows/ci-pre-commit.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-pre-commit.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
diff --git a/.github/workflows/release.yaml b/.github/workflows/release.yaml
index 6f108022..75e7cc00 100644
--- a/.github/workflows/release.yaml
+++ b/.github/workflows/release.yaml
@@ -18,7 +18,7 @@ permissions:
 jobs:
   prepare:
     name: Prepare
-    uses: CCPBioSim/.github/.github/workflows/release-prepare.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/release-prepare.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: write
       pull-requests: write
@@ -40,7 +40,7 @@ jobs:
   website:
     name: Website
     needs: prepare
-    uses: CCPBioSim/.github/.github/workflows/release-website.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/release-website.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
@@ -53,7 +53,7 @@ jobs:
   pypi:
     name: PyPI
     needs: prepare
-    uses: CCPBioSim/.github/.github/workflows/release-pypi.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/release-pypi.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
@@ -65,7 +65,7 @@ jobs:
   conda:
     name: Conda
     needs: prepare
-    uses: CCPBioSim/.github/.github/workflows/release-conda.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/release-conda.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with:
diff --git a/.github/workflows/update-copyright-years-in-license-file.yaml b/.github/workflows/update-copyright-years-in-license-file.yaml
index 54677d54..c40df758 100644
--- a/.github/workflows/update-copyright-years-in-license-file.yaml
+++ b/.github/workflows/update-copyright-years-in-license-file.yaml
@@ -10,7 +10,7 @@ permissions:
 
 jobs:
   update-license-year:
-    uses: CCPBioSim/.github/.github/workflows/maintenance-license-year.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/maintenance-license-year.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: write
       pull-requests: write
diff --git a/.github/workflows/weekly-docs.yaml b/.github/workflows/weekly-docs.yaml
index 32daa71f..f1c1a9ed 100644
--- a/.github/workflows/weekly-docs.yaml
+++ b/.github/workflows/weekly-docs.yaml
@@ -15,7 +15,7 @@ concurrency:
 jobs:
   docs:
     name: Docs build
-    uses: CCPBioSim/.github/.github/workflows/ci-docs.yaml@116d539cf0864af72d33dce047313ca6fc624ccd # 0.4.0
+    uses: CCPBioSim/.github/.github/workflows/ci-docs.yaml@43d3ed06eb774dfa813173770888a15f554c70cc # 0.6.0
     permissions:
       contents: read
     with: